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Deep sequencing data analysis / edited by Noam Shomron.

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Language:
English.
Publication date:
2013
Publication:
New York : Humana Press, [2013]
Copyright notice:
©2013.
Format:
  • Book
  • x, 234 pages : illustrations (some colored) ; 26 cm.
Bibliography:
Includes bibliographical references and index.
Contents:
  • Introduction to high-throughput sequencing experiments : design and bioinformatics analysis / Rachelly Normand and Itai Yanai
  • Compressing resequencing data with GReEn / Armando J. Pinho, Diogo Pratas, and Sara P. Garcia
  • On the accuracy of short read mapping / Peter Menzel ... [et al.]
  • Statistical modeling of coverage in high-throughput data / David Golan and Saharon Rosset
  • Assembly algorithms for deep sequencing data : basics and pitfalls / Nitzan Kol and Noam Shomron
  • Short read mapping for exome sequencing / Xueya Zhou ... [et al.]
  • Profiling short tandem repeats from short reads / Melissa Gymrek and Yaniv Erlich
  • Exome sequencing analysis : a guide to disease variant detection / Ofer Isakov, Marie Perrone, and Noam Shomron
  • Identifying RNA editing sites in miRNAs by deep sequencing / Shahar Alon and Eli Eisenberg
  • Identifying differential alternative splicing events from RNA sequencing data using RNASeq-MATS / Juw Won Park ... [et al.]
  • Optimizing detection of transcription factor-binding sites in ChIP-seq experiments / Aleksi Kallio and Laura L. Elo
  • Statistical analysis of ChIP-seq data with MOSAiCS / Guannan Sun ... [et al.]
  • Detection of reverse transcriptase termination sites using cDNA ligation and massive parallel sequencing / Lukasz J. Kielpinski ... [et al.].
Contributor:
Shomron, Noam, editor.
Springer Science+Business Media, copyright holder.
Series:
Methods in molecular biology, 1064-3745 ; 1038
Springer protocols, 1949-2448
Methods in molecular biology (Clifton, N.J.) ; v. 1038.
Springer protocols (Series)
Subjects:
ISBN:
1627035133
9781627035132

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